Davila Garvin, Maria; Mayer, Christian:
Structural Phenomena in a Vesicle Membrane Obtained through an Evolution Experiment : A Study Based on MD Simulations
In: Life, Jg. 13 (2023), Heft 8, Artikel 1735
2023Artikel/Aufsatz in ZeitschriftOA Gold
ChemieFakultät für Chemie » Physikalische ChemieForschungszentren » Center for Nanointegration Duisburg-Essen (CENIDE)
Damit verbunden: 1 Publikation(en)
Titel in Englisch:
Structural Phenomena in a Vesicle Membrane Obtained through an Evolution Experiment : A Study Based on MD Simulations
Autor*in:
Davila Garvin, MariaUDE
LSF ID
57996
ORCID
0000-0003-3209-7188ORCID iD
Sonstiges
der Hochschule zugeordnete*r Autor*in
korrespondierende*r Autor*in
;
Mayer, ChristianUDE
GND
100307078
LSF ID
501
ORCID
0000-0003-1681-0553ORCID iD
Sonstiges
der Hochschule zugeordnete*r Autor*in
Erscheinungsjahr:
2023
Open Access?:
OA Gold
DuEPublico 2 ID
Web of Science ID
PubMed ID
Scopus ID
Notiz:
OA Förderung 2023
Sprache des Textes:
Englisch
Schlagwort, Thema:
origin of life; molecular dynamics; peptide aggregation

Abstract in Englisch:

The chemical evolution of biomolecules was clearly affected by the overall extreme environmental conditions found on Early Earth. Periodic temperature changes inside the Earth’s crust may have played a role in the emergence and survival of functional peptides embedded in vesicular compartments. In this study, all-atom molecular dynamic (MD) simulations were used to elucidate the effect of temperature on the properties of functionalized vesicle membranes. A plausible prebiotic system was selected, constituted by a model membrane bilayer from an equimolar mixture of long-chain fatty acids and fatty amines, and an octapeptide, KSPFPFAA, previously identified as an optimized functional peptide in an evolution experiment. This peptide tends to form the largest spontaneous aggregates at higher temperatures, thereby enhancing the pore-formation process and the eventual transfer of essential molecules in a prebiotic scenario. The analyses also suggest that peptide–amphiphile interactions affect the structural properties of the membrane, with a significant increase in the degree of interdigitation at the lowest temperatures under study.